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| Wednesday, June 29th , 2016 |
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| Received 3B Raúl Aguilar from Major League San Diego. |
| Monday, June 13th , 2016 |
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| Received SP Rod Lee from Major League San Diego. |
| Wednesday, June 1st , 2016 |
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| Received RF Ángel Flores from Major League San Diego. |
| Sunday, April 10th , 2016 |
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| Received RP Don Pratt from Major League San Diego. |
| Wednesday, April 6th , 2016 |
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| Received SP Richard Tyler from Major League San Diego. |
| Received C Dave Kelly from Major League San Diego. |
| Received C Diego Morales from Major League San Diego. |
| Received 1B Carlos Barrios from Major League San Diego. |
| Received 1B Dave Battle from Major League San Diego. |
| Received 1B Michael Butler from Major League San Diego. |
| Received 1B Andrés Costa from Major League San Diego. |
| Received 1B Tim Dixon from Major League San Diego. |
| Received 1B Cade Elliott from Major League San Diego. |
| Received 1B Oliver Everhart from Major League San Diego. |
| Received 1B Bo Gould from Major League San Diego. |
| Received SP Santiago Tupas from Major League San Diego. |
| Received 1B Tom Jackson from Major League San Diego. |
| Received 1B Fernando Martínez from Major League San Diego. |
| Received 1B Jorge Martínez from Major League San Diego. |
| Received 1B Ray Morris from Major League San Diego. |
| Received 1B Mark Preston from Major League San Diego. |
| Received 1B Arturo Reyes from Major League San Diego. |
| Received 1B Gilberto Salazar from Major League San Diego. |
| Received 1B Fernando Saldaña from Major League San Diego. |
| Received 1B Ken Scott from Major League San Diego. |
| Received 1B Evan Tucker from Major League San Diego. |
| Received 1B Jesús Villalobos from Major League San Diego. |
| Received 2B Jack Anderson from Major League San Diego. |
| Received 2B Eli Bartlatt from Major League San Diego. |
| Received 2B Jody Bennett from Major League San Diego. |
| Received 2B Bob Braun from Major League San Diego. |
| Received 2B Adam Carter from Major League San Diego. |
| Received 2B David Christensen from Major League San Diego. |
| Received 2B Mike Clement from Major League San Diego. |
| Received 2B Bart Cooper from Major League San Diego. |
| Received 2B Charles Davis from Major League San Diego. |
| Received 2B Steve Deck from Major League San Diego. |
| Received 2B Coy Dudley from Major League San Diego. |
| Received 2B Larry Dyer from Major League San Diego. |
| Received 2B Cliff Eldridge from Major League San Diego. |
| Received 2B Juan González from Major League San Diego. |
| Received 2B Alan Goodman from Major League San Diego. |
| Received 2B Brett Gray from Major League San Diego. |
| Received 2B Craig Harris from Major League San Diego. |
| Received 2B Jim Hayes from Major League San Diego. |
| Received 2B Joo-hyun Hong from Major League San Diego. |
| Received 2B Shawn Mayfield from Major League San Diego. |
| Received 2B Mike Medina from Major League San Diego. |
| Received 2B Chuck Méndez from Major League San Diego. |
| Received 2B John O'Donnell from Major League San Diego. |
| Received 2B Phil Phillips from Major League San Diego. |
| Received 2B Rickey Ramos from Major League San Diego. |
| Received 2B Arturo Ramírez from Major League San Diego. |
| Received 2B César Romero from Major League San Diego. |
| Received 2B Hitoshi Sanu from Major League San Diego. |
| Received 2B Ken Snyder from Major League San Diego. |
| Received 2B Wyatt Sorensen from Major League San Diego. |
| Received 2B Juan Jose Soto from Major League San Diego. |
| Received 2B Jorge Terjirina from Major League San Diego. |
| Received 2B Joe Thompson from Major League San Diego. |
| Received 2B Shojiro Tsukamoto from Major League San Diego. |
| Received 2B Jorge Vargas from Major League San Diego. |
| Received 2B Jed Wagner from Major League San Diego. |
| Received 2B Ray Wheeler from Major League San Diego. |
| Received 3B Jon Atkinson from Major League San Diego. |
| Received 3B António Blanco from Major League San Diego. |
| Received 3B Calvin Craig from Major League San Diego. |
| Received 3B Clement Downs from Major League San Diego. |
| Received 3B Chet Drake from Major League San Diego. |
| Received 3B Burt Griffin from Major League San Diego. |
| Received 3B Archie Gunter from Major League San Diego. |
| Received 3B Carlos Manuel from Major League San Diego. |
| Received 3B José Martínez from Major League San Diego. |
| Received 3B Artie McCormick from Major League San Diego. |
| Received 3B Nick Meyers from Major League San Diego. |
| Received 3B Glenn Moore from Major League San Diego. |
| Received 3B Ignacio Navarro from Major League San Diego. |
| Received 3B Dan O'Neal from Major League San Diego. |
| Received 3B José Rangel from Major League San Diego. |
| Received 3B Artie Robinson from Major League San Diego. |
| Received 3B Sergio Rosário from Major League San Diego. |
| Received 3B Dave Ruíz from Major League San Diego. |
| Received 3B Larry Tipton from Major League San Diego. |
| Received 3B Dale Williams from Major League San Diego. |
| Received 3B Paul Wood from Major League San Diego. |
| Received SS Jamal Hoffman from Major League San Diego. |
| Received SS Dan Johnstone from Major League San Diego. |
| Received SS Alberto Peña from Major League San Diego. |
| Received SS Carlos Reyes from Major League San Diego. |
| Received SS Tony Rodríguez from Major League San Diego. |
| Received LF Ronald Camacho from Major League San Diego. |
| Received LF Brian Douglas from Major League San Diego. |
| Received LF Tony Franks from Major League San Diego. |
| Received LF Robert González from Major League San Diego. |
| Received LF Scott Hankins from Major League San Diego. |
| Received LF Scotty Gordon from Major League San Diego. |
| Received LF Tim Jackson from Major League San Diego. |
| Received LF António Javier from Major League San Diego. |
| Received LF Vincent Lee from Major League San Diego. |
| Received LF Tyler Mann from Major League San Diego. |
| Received LF Cristián Martínez from Major League San Diego. |
| Received LF Tetsu Mizuno from Major League San Diego. |
| Received LF Luis Sanmarón from Major League San Diego. |
| Received LF David Scott from Major League San Diego. |
| Received LF Felipe Zamora from Major League San Diego. |
| Received LF César Álvarez from Major League San Diego. |
| Received CF Kevin Carr from Major League San Diego. |
| Received CF Kevin Cowan from Major League San Diego. |
| Received CF Jerry Dixon from Major League San Diego. |
| Received CF Pablo Domínguez from Major League San Diego. |
| Received CF David Frost from Major League San Diego. |
| Received CF Chris Holcomb Jr. from Major League San Diego. |
| Received CF Jamal Howard from Major League San Diego. |
| Received CF Jerry Lane from Major League San Diego. |
| Received CF Jorge Macías from Major League San Diego. |
| Received CF Edward Matthews from Major League San Diego. |
| Received CF Lucas Myers from Major League San Diego. |
| Received CF Norbert Payne from Major League San Diego. |
| Received CF Ricardo Rivera from Major League San Diego. |
| Received CF Pedro Rosado from Major League San Diego. |
| Received CF Adrián Rosário from Major League San Diego. |
| Received CF Alfonso Saucedo from Major League San Diego. |
| Received CF Fred Smith from Major League San Diego. |
| Received CF Jorge Vallejo from Major League San Diego. |
| Received RF Haden Cruz from Major League San Diego. |
| Received RF Paco González from Major League San Diego. |
| Received RF Rob Graham from Major League San Diego. |
| Received RF John Hartman from Major League San Diego. |
| Received RF Brandon Hatfield from Major League San Diego. |
| Received RF Daniel McCarthy from Major League San Diego. |
| Received RF Dave Salas from Major League San Diego. |
| Received RF Gerard Smith from Major League San Diego. |
| Received RF Germán Sánchez from Major League San Diego. |
| Received RF Dennis Taylor from Major League San Diego. |
| Wednesday, March 16th , 2016 |
|---|
| Received SP Eric Davis from Major League San Diego. |
| Received SP Jeff Knight from Major League San Diego. |
| Received SP Darren Smith from Major League San Diego. |
| Received RP Edgar Barajas from Major League San Diego. |
| Received RP Kevin Hunt from Major League San Diego. |
| Received RP Frank Jones from Major League San Diego. |
| Received RP Juan Ramírez from Major League San Diego. |
| Received RP Mike Randall from Major League San Diego. |
| Received RP Thomas Reeves from Major League San Diego. |
| Received 3B Jesús Peña from Major League San Diego. |
| Received 3B David Pérez from Major League San Diego. |
| Received 3B Alfonso Gonzáles from Major League San Diego. |
| Wednesday, March 2nd , 2016 |
|---|
| Received SP Richard Tyler from Major League San Diego. |
| Monday, February 29th , 2016 |
|---|
| Promoted LF Raúl Días to Major League San Diego. |
| Promoted SP Eric Davis to Major League San Diego. |
| Promoted 1B Troy Larsen to Major League San Diego. |
| Promoted 3B David Pérez to Major League San Diego. |
| Promoted 3B Jesús Peña to Major League San Diego. |
| Promoted 3B Alfonso Gonzáles to Major League San Diego. |
| Promoted 3B Wally Baker to Major League San Diego. |
| Promoted SP Santiago Tupas to Major League San Diego. |
| Wednesday, February 24th , 2016 |
|---|
| Received C Darryl Walls from Major League San Diego. |
| Tuesday, November 24th , 2015 |
|---|
| SP Jesús Herrera becomes a free-agent. |
| RP José Romero becomes a free-agent. |
| 2B Gilberto Núñez becomes a free-agent. |
| 3B Danny Porter becomes a free-agent. |
| Wednesday, October 7th , 2015 |
|---|
| RP Manny Martínez retired from professional baseball. |
| C Bill Cunningham retired from professional baseball. |
| LF Joe Gibson retired from professional baseball. |
| 2B Orlando Mendoza retired from professional baseball. |
| SP Jeff Hendrickson retired from professional baseball. |
| SP Earl Farrell retired from professional baseball. |
| CF Jesús Alonso retired from professional baseball. |
| 1B Bryan Russell retired from professional baseball. |
